Life Science: Biology Regents Review // New York Biology Exam

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Today we're going to be doing a course review for the content on the life science biology
regents exam in New York.
Now if you're watching from another state, this video still might be helpful for you,
but you always want to check with your teacher and your state standards to make sure you're
studying the right things for your end of course exam.
I also have lots of other biology and study resources on this channel, so be sure to check
those out and subscribe for good luck on your tests.
Now the regents life science biology exam is going to be slightly different than the
living environment exams that you might have looked at from past years.
The content has changed a little bit, so this video is going to cover some of the main ideas,
content wise.
But remember that this exam is going to test a lot of skills like using models, analyzing
and interpreting data, using mathematics and computational thinking, all those science
and engineering practices you might have heard about in your class.
All of this background knowledge will still be helpful for you on the exam, but it might
be a little different from the order in which you learned it in your biology class.
There also may be some things in this video that don't show up on the exam, but hopefully
it will help you with your review.
So grab your notes, get ready, and let's review.
It's important to talk about feedback within cells and organisms and ecosystems that help
keep living things alive.
Feedback loops are going to help us maintain homeostasis, which is a balance of conditions
inside the body that organisms need to stay alive.
So for example, water levels, temperatures, heart rates.
If organisms can't maintain homeostasis, it can often cause disease or death.
So let's take a look at some of this feedback.
For example, we have our blood pressure, which is regulated in the body.
That's a type of feedback.
We might have a normal blood pressure to begin with.
A stressor causes our blood pressure to rise above a normal point, and then receptors in
our body are going to detect change.
They're going to decrease our heart rate and increase the blood vessel diameter, so
the size of our blood vessels, which will help our blood pressure return to normal.
And we have that feedback mechanism working.
Now, if this feedback wasn't working properly, we could have a continued high blood pressure
rate, which could end up causing problems for the organism.
Not just humans are going to experience feedback.
These are what's called stomata, these little openings in plant leaves here.
And these can open and close based on the amount of water or plant hormones or other
stressors in the environment that are going to send signals for these guard cells, which
are surrounding the stomata, to either close and prevent water from leaving the plant leaves
or open up if they need to allow certain gases in, like carbon dioxide, in order for photosynthesis
to occur.
Now, cells can also regulate themselves by letting certain things in or out.
And in general, we have three main types of cell transport that we'll talk about in
biology.
Diffusion, facilitated diffusion, and active transport.
Remember, diffusion is the movement of molecules from high to low.
And so I like to use this slide metaphor to talk about it.
If you think about a child going from high to low, it's like molecules going from a high
concentration to a low concentration without any extra energy needed.
Now, facilitated diffusion, you might think of a kid going down the slide with a little
help, and often that's a molecule going from a high concentration to a low concentration
with the help of a transport protein.
And active transport, we would need to introduce more energy because that's the kid going from
a low concentration to a high concentration up the slide, and that energy is ATP.
So let's see a diagram of this.
We have simple diffusion, high concentration to low concentration.
Facilitated diffusion, we have molecules going through proteins from high to low, and then
active transport, we have molecules going from a low concentration to a high concentration,
but they need energy to do that.
Now, all living things contain DNA, and DNA is found in the nucleus of eukaryotic organisms
or in the nucleoid of prokaryotic organisms.
DNA's monomers, remember, are nucleotides, so that means they contain a phosphate, a
sugar, and a base.
The sugar is called deoxyribose, hence the name deoxyribonucleic acid.
Now, we talk about how DNA is our genetic code and it makes us who we are.
How do we get from a DNA code in the sequence of different nucleotide bases to the actual
physical characteristics that we have?
Well, it's all about the central dogma of biology, which is also called protein synthesis,
which means the process by which DNA is transcribed and translated into proteins or how proteins
are made.
So you probably remember that we start with DNA, it gets transcribed into an mRNA message,
and then that message will help tell the ribosomes how to build the correct sequence of amino
acids to make a protein.
So let's take a look at a model of how this works.
We start with an original DNA strand in the nucleus, that DNA separates with the help
of enzymes, and then another enzyme comes in and helps add RNA bases that are complementary
to the DNA strand, and this forms an mRNA strand which can leave the nucleus, and then
that mRNA will go to the ribosome, where each set of three mRNA bases, so here GAG for example,
will meet up with a tRNA molecule, and that will bring over an amino acid.
Then those sets of three amino acids or codons will continue to be read by the ribosome,
linking up more and more amino acids until we have a full protein sequence.
Now, most proteins are dozens if not hundreds of amino acids long, this is just a really
big simplification here, but the order of amino acids is going to determine how it folds
on itself and becomes a functional protein.
Alright, moving right along to photosynthesis.
Remember photosynthesis transforms light energy into chemical energy, it's how plants and
other organisms harness the sun's energy in order to generate the glucose they need,
which then can be used in processes like cellular respiration.
So this is the general equation for photosynthesis, you might even see it written out like this,
where we have sunlight, carbon dioxide, water, generating glucose, C6H12O6, and oxygen.
Remember that photosynthesis occurs in the chloroplast organelle in plants, and also
remember that ultimately, most of the energy for life on earth comes from the sun, so photosynthesis
is going to provide that connection between the sun's energy and the needs of the rest
of living things.
Now it's not just plants that are going to use photosynthesis, but also algae and bacteria,
so other organisms can perform this process too, and the food that they're making is actually
glucose, so that's important to remember.
Here's again the equation in words, if you want to pause to write it down.
We zoom into a plant and a leaf, on side the leaf here, those guard cells again, and we
can, it's a little blurry here, but we can see those chloroplasts in the micrograph here,
and remember chloroplasts contain chlorophyll, which is the pigment that absorbs those photons
or the energy from the sun.
Now this is related to cellular respiration because the outputs of photosynthesis are
going to be the direct inputs in cellular respiration.
So remember photosynthesis takes in sunlight energy, carbon dioxide, and water, and it
is going to release glucose and oxygen, which we need for cellular respiration.
So cellular respiration takes place in the mitochondria of eukaryotic organisms, and
it's going to involve taking oxygen and glucose in, and then using those glucose molecules
to generate ATP energy for the cell, as well as water and carbon dioxide as byproducts.
Now we need this process in every single one of our cells, so the oxygen that we inhale
every day from the air is going to go to that cellular respiration process, and we know
that the carbon dioxide that we exhale comes from cellular respiration.
We also get the glucose for this process from the food that we eat.
All eukaryotic organisms are going to perform cellular respiration.
Here it is again in equation form, but remember that there's not just one type of respiration,
we also have anaerobic respiration, or a type of respiration that occurs without the
presence of oxygen.
Now a lot of organisms are going to use anaerobic respiration, even us and our muscle cells
when we run low on oxygen, but remember that this process is a lot less efficient than
cellular respiration, which involves oxygen.
So we generate more ATP with cellular respiration that is aerobic than we do with respiration
that is anaerobic.
And let's go back to the carbon cycle.
So remember that carbon and other elements are constantly cycling through the environment
through different processes, and two of those main processes that link carbon to the environment
are photosynthesis and cellular respiration.
So remember plants and other organisms harness sunlight energy and take in carbon dioxide
to generate glucose, and that glucose is consumed by other organisms, and eventually the carbon
in the glucose is exhaled through respiration, it can also be broken down in decomposition
processes, and then when organic matter is burned, released as combustion, and then that
carbon dioxide can go back into photosynthesis or absorbed by the ocean in some cases.
Another cycle that's important is the nitrogen cycle.
So you don't need to know all the steps of the nitrogen cycle, but nitrogen is very abundant
in our environment, and we need nitrogen in the molecules in our cells.
However, humans and many other animals and plants can't use nitrogen in the form that
it's found in the air.
So plants and animals rely on the nitrogen cycle to change nitrogen into a form they
can use, and we notice that bacteria plays a really big role in the nitrogen cycle by
converting nitrogen into different nitrogen products, like ammonium, and then nitrate,
which can be taken up by roots of plants, and then consumed by other animals, and then
when organisms decompose, it's converted back into ammonium and nitrate again.
We can also get nitrogen fixation into the soil through lightning strikes, which is pretty
interesting, but just know that nitrogen is constantly moving throughout the environment
just like carbon is.
And so just like these elements are moving throughout living things, so is energy.
When one organism consumes another, it consumes its molecules, which contain energy, and here
we have a simple food chain, but remember that as we go up in trophic levels or energy
levels of organisms consuming each other, we lose a lot of that energy.
So the most energy is found at the bottom of a trophic pyramid.
Most of the energy is lost at heat, and in a lot of ecosystems, we see the most organisms
and the most biomass, the most actual mass of all the organisms in an area, at the bottom
levels of these pyramids, and then we see less primary consumers, and then secondary
consumers, and then tertiary and quaternary consumers, so as we go up in trophic levels,
a lot more energy is lost as heat to the environment.
So ecosystems are very complex, and there's a lot of interactions between different organisms
and different factors like the amount of food, the amount of water, competition, diseases
can affect how many organisms of a certain species can grow in an area.
You might see a graph like this, which shows an organism growing and growing and growing
until it kind of levels off at a certain point.
You should recognize this pattern as a graph for the carrying capacity of a population.
So when it reaches the maximum level of population that an environment can sustain, that's called
the carrying capacity, which we'll see in a lot of different circumstances.
Now, ecosystems can undergo large-scale changes from things like forest fires to eutrophication,
which is when we have excess nutrients introduced to a system, and then one type of organism
kind of overgrows and outcompetes others, and it's going to alter the environmental
balance of an area.
But other dramatic events like fire and flooding and earthquake can cause huge changes to an
ecosystem too.
Remember, for humans, we rely on a lot of Earth's resources, including renewable ones,
which can be replaced by natural processes relatively quickly, and a non-renewable one,
which really can't be replaced within human lifetimes.
So like forests and trees can regrow relatively fast, and sunlight is renewable because we
always have the sun shining on us.
But other things like fossil fuels are limited, and they can be used up by humans.
And one of the main issues that we have in sharing these limited resources is human population.
And we know that humans are a major source of environmental change, and so we have to
keep an eye on how we interact with the environment and the biosphere to protect our resources
and these processes.
You might have heard of global warming, which is an increase in the average temperature
of the biosphere.
And we know it's mainly the result of humans burning fossil fuels, which adds gas to the
atmosphere, causing it to hold more heat.
And continued global warming can lead to rising sea levels and coastal flooding.
But we can look after the health of our biosphere by conserving resources and cutting back on
greenhouse gas emissions.
Other disruptions that might influence an environment are things like the introduction
of a native species, which can out-compete native organisms, introductions of diseases,
which can wipe out native populations, or other human-caused habitat changes like urbanization
or pollution, deforestation, or logging.
All right, a quick reminder about DNA and chromosomes.
Remember that DNA is condensed in the form of chromosomes and cells, but this is actually
a bad representation of that.
The DNA is folded over tiny little proteins in super, super long strands, so it looks
more like this rather than this inside the cell.
And you can kind of see another representation of that folding here around these proteins
and the twisting and the curling to form the condensed chromosome.
Now, the DNA will condense into chromosomes in order to prepare for cell division.
And just a little bit of vocabulary reminder, within the cell when that DNA is not condensed,
it's in the form of chromatin, which we see here.
And then one single duplicated chromosome looks like this X or butterfly figure.
And then the identical strands of DNA on either side are called sister chromatids.
So this is a sister chromatid, and this is a sister chromatid.
The whole thing is a chromosome, and this here is chromatin.
So if you need to go back and review that, that could be helpful for you.
Now, before cell division, the DNA will condense into chromosomes, like we see here.
And that is part of the cell cycle.
So the cell cycle has a lot of different checkpoints that allow the cell to perform
the processes and different parts of its life cycle that it needs to do
in order to survive and then later on divide in the M stage.
So most of the cell cycle is what's called interphase, which includes G1, S, and G2.
And then the M phase is where it's going to go through cell division and split into two new cells.
Now, remember, DNA has to replicate or duplicate itself,
and that happens during the S phase of the cell cycle, so that when it goes through mitosis,
we don't end up with half the amount of DNA in each daughter cell.
We end up with an exact copy of the DNA in each daughter cell.
And then finally, this final stage here, cytokinesis,
is when the cell actually physically splits into two new daughter cells.
In order for that DNA to replicate, it's kind of similar to protein synthesis,
where the DNA will be split apart and then new nucleotides will be added to each strand.
So we end up with two strands of DNA, one old and one brand new with new nucleotides.
And we see here A pairs with T, G pairs with C, etc, etc.
And these strands are identical.
We call this semi-conservative DNA replication.
All right, so when we're actually going through mitosis, you might have heard,
we go through a bunch of different stages, which you may or may not have had to memorize,
as PMAT, prophase, metaphase, anaphase, telophase, and then, of course, cytokinesis.
But very quickly, the chromosomes are condensing before mitosis occurs.
Prophase, the chromosomes are preparing for cell division.
The nuclear envelope is dividing.
These spindle fibers are going to come and attach at the center of the chromosomes
as they align in the cellular equator in metaphase.
In anaphase, sister chromatids are pulled apart towards opposite ends of the cell.
In telophase, the new nuclear envelope starts to form.
The chromosomes decondense back into chromatin.
And then in cytokinesis, we have the actual splitting of the membrane into two new cells.
All right, now you've also probably heard of meiosis as well.
A good way to remember the difference is mitosis is just regular growth
and copying and cell division.
It's happening all the time in our bodies.
So think about the growth that's happening in your toe.
My toe, mitosis.
But to make a whole new organism, we actually need cell division to go through meiosis.
So to make me, a whole new person, you would do meiosis.
Now, remember, cell division is just going to happen normally
all the time in our bodies in order to grow.
But we know that not every cell in our body is exactly the same.
And so cells can differentiate or end up activating different parts of their DNA
or in order to look structurally very different.
So every organism will have the same DNA in all their cells.
But in each cell, we may have different parts of that DNA expressed
or turned on in order to generate the proteins it needs to look the way it will.
So different parts of the DNA are activated and expressed in muscle cells.
And different parts of the DNA are activated and expressed in things like neurons.
The cell cycle is pretty important.
And there's a lot of, like I said, checkpoints that the cell has to go through.
But sometimes those checkpoints, which are regulated by proteins,
can get messed up.
And that's when we have issues like cancer.
So if the cell continues to divide when it shouldn't,
and we have uncontrolled cell growth,
that is when the cells are going to divide and divide and divide in your own body.
And your own cells can produce things like tumors,
which can make people very sick, which is the disease of cancer.
Usually these issues are called by mutations in the cell's DNA.
And so the DNA is going to produce these different proteins called cyclins.
And when the cyclins are disrupted or they don't,
or they're not produced at the right amount,
the cell can continue with uncontrolled cell growth and cancer.
But there's a lot of other components and different functional parts of cells
that we're going to review today.
Remember that all cells and all living things are surrounded by a membrane.
That's that phospholipid bilayer.
They contain genetic information in the form of DNA,
and they do have cytoplasm.
But we do see differences between prokaryotic and eukaryotic cells.
So prokaryotic cells are a lot simpler.
They do have a membrane and ribosomes and genetic information,
but you see that it's free-floating in the cell in what's called a nucleoid.
Eukaryotic cells are much larger and more complex,
and they have membrane-bound organelles.
So organelles that are surrounded by a membrane of their own,
which means that their reactions are compartmentalized,
and they can be more efficient and do more things.
All bacteria are prokaryotic, and things like animals and plants and fungi,
those are eukaryotic organisms.
Most importantly, eukaryotic organisms have a nucleus
which surrounds their genetic information.
Prokaryotic cells, once again, do not.
All right, so let's talk about some of those major organelles within the cell.
I'm going to tell you what the function is,
and I want you to try to think about what the name of the organelle is
and what it might look like on a cell diagram,
and I'll tell you what the answer is right after I read the definition.
So a large fluid-filled sac that stores nutrients
and helps maintain cell structure in plants specifically is a vacuole.
Now animal cells have vacuoles as well,
but in plant cells they can be much larger
because that water storage component is very important.
A membrane-bound sac that contains enzymes
that break down waste products and damaged organelles,
that is a lysosome.
Now on a diagram you might just see this as a circle with a membrane around it,
but remember that lysosomes are often referred to
as the garbage disposal of the cell
because they're responsible for breaking down waste.
An organelle responsible for modifying and packaging proteins
and other molecules for transport within the cell
or export from the cell is the Golgi apparatus or the Golgi body.
Now you might see that illustrated as a series of several different membranes
like this here on a cell model.
A network of tubules and sacs that helps transport proteins
and other molecules within the cell,
that's the endoplasmic reticula or ER.
Now we see the ER here, this is the SER or the smooth ER,
and this is the RER or the rough ER.
And you notice the difference between the RER and the SER
is that the RER or the rough endoplasmic reticulum contains ribosomes.
A small structure that produces proteins in cells are the ribosomes
which are often illustrated as little dots within the cell
which we saw here and again on the RER.
And a rigid structure that surrounds the cell membrane of plants
and some other organisms like bacteria is the cell wall
which we can see can exist on eukaryotic organisms
and on some prokaryotic organisms as well.
Animal cells do not contain a cell wall.
The gel-like substance inside the cell membrane is the cytoplasm
and an organelle in plant cells that uses sunlight to produce food
is the chloroplast which is often illustrated
as a circle with these different stack-like structures.
And we'll talk a little bit more about the chloroplast later
when we get to photosynthesis.
One more for today.
The site of energy production within eukaryotic cells
is a mitochondrion or plural the mitochondria.
Remember you probably heard that mitochondria are the powerhouse of the cell
and they're often illustrated as ovals with little squiggles.
Those are the inner membrane folds of the mitochondria.
So we talked about mitosis and meiosis.
Let's go back to meiosis a little bit.
Remember that meiosis is not going to produce identical daughter cells.
They're going to produce what are called haploid cells
and in humans as sperm or egg cells.
And these haploid cells contain half the genetic information
as the original parent cell.
When fertilization happens we combine two cells
to have a complete fertilized zygote or egg
which has a complete set of chromosomes.
Then that zygote or fertilized egg cell can undergo mitosis
grow and grow and grow until the cells are ready to differentiate
into all the cells that are going to make up an organism.
Human reproduction and development are influenced by a lot of different factors
including hormones, the environment, and gene expression.
In both males and females our reproductive cycle is regulated
by the cycling of different hormones throughout the body
including testosterone, estrogen, and progesterone.
The cycling of hormones during the female menstrual cycle is shown here
is going to involve a series of natural changes in hormone levels
in order to produce the physiological effects in the uterus and the ovaries
that are going to make pregnancy possible.
Let's take a look at our gonads or our sex organs in human males and females.
We have gametes or our egg cells produced in the ovaries
and then those eggs will leave through the fallopian tube seen here.
Once a fertilized egg implants in the lining of the uterus
the uterus is going to provide an environment
that's going to support the development of the embryo and the fetus.
The placenta which is connected to the developing embryo through the umbilical cord
is going to provide essential nutrients and the materials for the developing fetus.
In males the sperm are produced in the testes as seen here
and both sperm and urine are going to pass through the urethra
in the male reproductive system.
During embryonic growth in human pregnancy
the development of important essential organs
occurs early during the developmental stages.
Here again we see another impact of environment on genes
because if the mother is exposing herself or the fetus
to negative environmental conditions like alcohol or tobacco smoke
that could have a very detrimental effect on the growing embryo.
That's why it's important to avoid the use of alcohol drugs and tobacco during pregnancy.
Now you do not need to know all the phases of meiosis
but do know that we start with a duplicated set of chromosomes
just like we do in mitosis
and we're going to go through all the stages two times
in order to end up with half the genetic information as the parent cell.
Now different events in meiosis
where the chromosomes don't split apart the way they should
can lead to different chromosomal conditions
meaning that in those egg cells and after fertilization
we have a variation on the number of chromosomes
that we would typically see in human cells.
So you might have heard of something called trisomy 21 or down syndrome
that's when we have three copies of the 21st chromosome instead of two
and these extra or missing chromosomes can have varying effects on humans
from a variety of symptoms to having huge effects on the organism.
These are what are called karyotypes
which is where we line up all of the chromosomes
for a picture in different organisms
and so a typical biological female will have two X chromosomes
and a biological male will have an X and a Y chromosome
so there are different chromosomal conditions which can vary
and sometimes we see XXY or just a single X, XYY
there's a lot of different variations.
So here's a look at trisomy 21
if you look at that 21st chromosome we see three copies.
Now we know that we can have a lot of variation among humans
even among siblings in the same family
and some of that genetic variation comes from different ways
the chromosomes align and combine during meiosis.
So one of the major things that happens is something called crossing over
when those homologous chromosomes line up during prophase one of meiosis
during that crossing over the arms of some of the chromosomes
are going to cross over each other literally and switch positions
so we end up is kind of a nice combination of different traits
from the two parents.
We can also have these chromosomes lining up in different orders
and combinations through independent assortment
which is going to allow us to have a different distribution of traits
after the process of meiosis.
Now mutations can also occur but some of the major sources for variation
in different organisms are going to be from things like that
independent assortment and crossing over.
Now remember that if there is a mutation
a change in the DNA sequence can result in a change in the protein
which can lead to an altered protein function
if it doesn't fold the way it normally does
which leads to a different phenotype
or a different physical characteristic in the organism.
So this is Gregor Mendel he's the father of genetics
so he determined that a single gene could have two different alleles or versions
such as a dominant and recessive version
and those different combinations could lead to expression
of different traits and organisms.
So if you want to pause and do this exercise real quick
you can identify which genotypes here
combination of alleles are either heterozygous or homozygous
or homozygous dominant or homozygous recessive
I'll put the answer in just a minute here
there we go
and remember that the phenotype is the physical characteristic
caused by the genotype of a different organism
so for here if we know that yellow body color is dominant to blue
determine the phenotype of each fish
and at the bottom we have gray being dominant to orange
so determine the phenotype of each owl
you can pause it if you want
here are the answers
all right let's take a look at a punnett square
and how you would set that up
so in axolotls and other organisms albinism is a trait that is recessive
so if two parents with pigments
they have at least one of these big alleles mate
what are our chances that the offspring will be albino
or have this lack of pigment
so here we have this combination of two heterozygous parents
they both have pigment and they both have big a little a
so we separate those genotypes on the punnett square
one on each side
and then we're going to drop down the letters into each box of the punnett square
and here are our results
so it looks like there's a one out of four chance
or 25% chance that the offspring of this cross
will have that albino phenotype
and there's a three out of four or 75% chance
that it will not be an albino axolotl
now punnett squares are fun
but it is important to note
that most human traits are very complicated
and caused by many different genes
meaning they're polygenic
there's also so we know that a lot of characteristics in humans are on a spectrum
and it's not one thing or the other
there are certain genetic conditions
like cystic fibrosis and huntingtons
that are caused by single alleles
but those are more rare
and more commonly we have many complex genes interacting together
so one of those ways that genes don't work the same way
that mendel came up with are codominance
so that's when we have a combination of both traits in the offspring
instead of having one or the other
we see both of the phenotypes appear
and here would be a cross
we use capital letters to represent codominant traits
blood types are an example of codominance
when we see the a b blood type together
it's because an individual has a genotype of big i a big ib
we use the i here to represent blood type
because there's also type o blood
which is recessive to that capital i with the a or the b
so we can end up getting four possible phenotypes for blood type
you can be type a type b type o or type ab
and those come from the different potential genotypic combination
we're not going to get into the positive negative
that's the rh factor here
that's for another biology class
but here would be how you would set up a cross
for a type a homozygous individual
and a type b homozygous individual
so we would put their genotypes on either side of the punnett square
and it looks like if these two individuals cross
we would have a hundred percent chance of their offspring
ending up to be type a b blood
let's see it again with an individual that has a genotype
for a type that has type b blood
but they also carry a little i allele
same thing over here
they have type a blood but they carry that little i allele
and in this case with this cross
we have a 25 percent of these two parents
having kids with type o blood
and we noticed that they had the same phenotypes
so the same type a and type b in this situation
but because the genotypes are different
we get different results
in the potential genotypic combinations for the offspring
all right you also might see incomplete dominance
where instead of seeing both phenotypes represented
we see a blending of traits here
so the red and the white would combine to form pink
a lot of traits too can be polygenic or polygenic
and we see the distribution of these traits often on a bell curve
so if we see this kind of distribution in a particular trait
we can infer we can guess that it is controlled by multiple genes
so in this case we're seeing a trait for height
and we know that because there's this bell curve pattern on the graph
that it's a trait that's polygenic or controlled by multiple genes
now some traits are actually altered by environmental factors
certain reptiles or sex can be determined by the environmental temperature
that they experience while they're developing
another example is hydrangea flower color
now if they have different exposure to different phs in the soil
they may end up being a different color in the garden
we can use dna to determine how related or similar different species are
especially when we're trying to draw lines between evolutionary relationships
for example we can take a look at some dna samples
or even protein samples or sequences of amino acids and proteins
and see how similar they are to different species
so in this list we have protein a from species one
and in the table we're showing that same protein in different species
and how similar it is to that same protein in species one
so if we look at these percentages we can see that species three here
is actually most closely related to species one
because it has the greatest similarity in that protein a structure
another great tool for determining relatedness
or drawing connections and evolutionary relationships
is gel electrophoresis and that's when we take dna samples
we cut them up with restriction enzymes
and we run them through a gel matrix with a current
so dna is negatively charged
it'll be attracted towards the positive end of the gel
and it'll move down the gel in this direction as we run the current
and then we can see how similar the dna is based on the separation patterns
of the fragments
so for example the mother here we can see
has a similar gene pattern with child a here
a similar gene pattern with child b here
but no similarities with child c
so this mother is probably not biologically related to child c
based on their dna banding patterns
we can also use this in forensic analysis
so if we have evidence at a crime scene
we can compare the evidence the dna evidence
to the dna of the suspects accused of the crime
so if you want to pause and try to figure out which suspect
best matches the evidence at this crime scene you can do that
so here's our evidence
and we note that suspect three is an exact match
with our evidence here on our gel electrophoresis
so we can figure out who committed the crime
by matching that dna to the crime scene
now gel electrophoresis is just one type of biotechnology technique
there are many others
and biotechnology broadly is
when humans use organisms or parts of organisms
and modify them to create products or tools for human use
often biotechnology is used to create drugs
or other substances used in health care
genetic engineering
development of medical treatments
agriculture
biotechnology is everywhere
and it's interdisciplinary
and we have a lot of exciting things that are going on with biotechnology
so obviously there are ethical questions that come up with any new technologies
and so there's a lot of good questions that are out there
from you know using CRISPR to edit embryos
or bringing back the woolly mammoth
or doing advanced genetic screening on humans
or even sterilizing mosquitoes
so that they won't go and grow their populations
and bring new diseases to an area
and lab-grown meat
so all these things are within the realm of biotechnology
and all of them bring up good ethical questions to discuss
all right we're moving forward here to evolution
which broadly is the change in the genetic makeup of a population over time
natural selection is a major mechanism of evolution
and a good term to know is evolutionary fitness
which is measured by reproductive success
so that is how likely an organism is to survive reproduce and pass on its gene
genes we know that environments are going to change
and act as a selective mechanism on populations
and so let's take a look at what natural selection looks like up close
so this is a bacterial population
and here we have an antibiotic that a person takes
because they have a bacterial infection right
they have a lot of bacteria grown in their bodies
some of these bacteria the pink ones
they're going to be resistant to that antibiotic
so let's see what happens when the antibiotic comes
it's going to kill off most of the bacteria
but the ones that have the resistance
are going to be able to grow and survive
without the competition of the dead ones now
and so what we've done is we've changed the population
and the makeup of the population now is mostly antibiotic resistant
and so that is natural selection in just a few steps there
and so we see this with pesticide resistance
we see this with antibiotic resistance
or with any other trait over time
where we see one trait that is more favorable in a particular environment
allowing those organisms to survive reproduce
and pass on their genes more successfully to their offspring
now we see evidence for evolution in a lot of different areas
from the fossil record to geographic evidence
to DNA and amino acid sequences
so this biochemical evidence to embryology
and seeing similarities in how organisms develop
all of these things provide evidence that different species are related
through common ancestry
now here's Darwin again
he was the guy who came up with this main model for natural selection
and his ideas behind natural selection are that
species often are going to have more offspring
than an environment can support
so there's a struggle for survival
competition for limited resources
and so the ones that have the traits best suited to their environment
are going to be the ones that have the competitive advantage
over other individuals in that species
and so when we go into different environments
we can see different variations of different traits
in varying population
and different success and survival rates
based on those varying traits
now an adaptation is a genetic variation that is favored by selection
and provides an organism with an advantage
in a particular environment
but if the environment changes
that adaptation may not be as favorable
so it's all dependent on the environment that the organism is in
and sometimes we see things like
similar adaptations in different populations
so here in the arctic
we have natural selection driving the adaptation of white fur
and a lot of different animals
like polar bears and foxes
because the individuals with white fur have a survival advantage
because they can camouflage against the snow
which allows them to better hunt or prey or evade predators
so these organisms aren't all closely related
but they are all demonstrating the same trait
because it helps them survive in their environment
and it's beneficial over time
now again like I said environments can change
and sometimes you know
environments experience things like droughts
and in that case the organisms that are best suited to survive
are going to be the ones that are drought resistant
and so we may see here in this environment
certain species or individuals and populations dying off
and then other individuals that have variations of traits
that are more suited to that dry environment
and can withstand low water availability and high temperatures
being more likely to survive and pass on their traits
and so over many generations
we might see a complete change in this population over time
but within a single population we may see variation
so here this is just four different populations
and we can see that different ones have different variations
based on the colors that are displayed
now if there's a change in that environment
let's say a disease that wipes out all the green individuals
the populations that are more diverse
are actually going to have a better chance at surviving
because some of them are more resistant to the disease
so it's always good to have diversity in a population
because they're more resilient to changing environmental conditions
so let's wrap up with a review of the three domains of life
we have bacteria, archaea, and eukaryota
eukaryota include all the eukaryotes like plants, animals, fungi, protists
so in these three domains
bacteria are familiar to most people and associated with disease
but there's a lot of bacterial species that do not cause disease
and play beneficial roles in our environment
and in biotechnology and the soil is full of bacteria
that perform essential functions in the biosphere
we have a whole bunch of bacteria living on us as part of our microbiome
archaea is its own domain
they are prokaryotic, they're single-celled
and they are both best known as being extremophiles
or organisms that live in really extremely harsh environments
and finally eukaryotes
like I said they are composed of eukaryotic organisms
protists, fungi, plants, animals
and they include you and me
so phylogeny is the study of evolutionary history
and the relationships between different groups of organisms
based on the idea that all organisms share a common ancestor
a phylogenetic tree or a cladogram is a visualization of evolutionary relatedness
between species
the lines are not always drawn to scale
sometimes they are
but oftentimes it's just displaying the relationships
not the length of time that different organisms branch off from each other
so we can also see traits that appear on cladograms or phylogenetic trees
so here we have each hash mark is a trait
and everything that came after it includes that trait
so for example
ferns, pine trees, and flowering plants all have vascular tissue
seeds developed
next so pine trees and flowering plants have seeds
and only flowering plants have flowers on this cladogram
okay let's go through a brief timeline of some major events in earth's history
the timeline of life on earth is huge
and this is not representative of all the major events that occurred
in the evolution of different species on this planet
about 4.6 billion years ago earth was formed
bombarded by meteorites and comets
and then around 3.8 billion years ago
we think the first replicating molecules
which were the precursors to RNA or DNA first formed
then we think around 3.5 billion years ago
our first unicellular life evolves
and we have for the first time photosynthetic bacteria releasing oxygen into the atmosphere
now certain events have transformed the earth and its systems
both living and non-living
including the rise of oxygen
also called the great oxidation event
when we first started to get oxygen in our atmosphere
due to the release of oxygen by cyanobacteria
these are the first organisms that ever performed photosynthesis on earth
and as oxygen entered the oceans and eventually the atmosphere
it did lead to the extinction of a lot of other organisms
but eventually led to the rise of aerobic respiration or aerobic metabolism
and ultimately the evolution of lots of different life on earth
including multicellular organisms
we know that oxygen is essential to life on earth today
it has transformed the way that the earth functions
and living organisms interact on this planet
plenty of ways where humans can have a positive impact on the environment
so the classic word reduce, reuse
if we reduce our consumption of certain resources
or we recycle and compost our resources
so instead of generating more waste
which causes more problems in environments
if we're composting we're reducing the buildup of things like methane gas in landfills
and it's going back into the ground
where decomposers can do their work
and return those molecules into biogeochemical cycles
that are healthy for environments
planting native species is another way that's hugely beneficial
for the biodiversity of an area
instead of planting non-native or invasive species
which could end up causing harm to a local ecosystem
of course supporting sustainable practices
a lot of this is out of our hands as individuals
but we can support companies that have sustainable practices
or vote for legislation that we know will support the environment
and of course advocating for environmental policies
like I said before when we banned the use of CFCs in certain products
that actually did have an effect
we stopped increasing the hole in the ozone layer
and it is ending up starting to heal
that is it
thanks so much for watching
you've gotten through an entire year's worth of biology content
good luck with your studying and your review
thanks so much for watching
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and I'll see you later
